ggseg - Plotting Tool for Brain Atlases
Contains 'ggplot2' geom for plotting brain atlases using simple features. The largest component of the package is the data for the two built-in atlases. Mowinckel & Vidal-Piñeiro (2020) <doi:10.1177/2515245920928009>.
Last updated 1 years ago
202 stars 6.01 score 47 dependencies 14 dependentsmeetupr - Meetup R API
Provides access to data from <https:www.meetup.com> (see <https:www.meetup.com/meetup_api/> for more information).
Last updated 2 years ago
apiapi-wrappermeetupr-ladiesrladiesrladies-global
76 stars 3.87 score 44 dependenciesggseg3d - Tri-Surface Mesh Plots for Brain Atlases
Mainly contains a plotting function ggseg3d(), and data of two standard brain atlases (Desikan-Killiany and aseg). By far, the largest bit of the package is the data for each of the atlases. The functions and data enable users to plot tri-surface mesh plots of brain atlases, and customise these by projecting colours onto the brain segments based on values in their own data sets. Functions are wrappers for 'plotly'. Mowinckel & Vidal-Piñeiro (2020) <doi:10.1177/2515245920928009>.
Last updated 11 months ago
30 stars 3.69 score 70 dependencies 13 dependentsggsegExtra - Extra Utilities for the 'ggseg' and 'ggseg3d' Plotting Tools
Contains functions to create new data sets compatible with the 'ggseg' and 'ggseg3d' packages for plotting brain segmentations through R. Requires several external software to be installed on the system for atlas creations to work, and most of these are not available for windows. But atlas creation tools exist for 2d simple features data, and also 3d tri-surface mesh plots. Also has a list of compatible data sets and functions for easy installation of these.
Last updated 2 years ago
47 stars 2.89 score 129 dependenciescolorhex - Colors and Palettes from Color-Hex
The website <https://www.color-hex.com> is a great resource of hex colour codes and palettes. This package allows you to retrieve palettes and colour information from the website directly from R. There are also custom scale-functions for 'ggplot2'.
Last updated 1 years ago
color-hexcolor-pickercolors
18 stars 1.80 score 42 dependenciesuiothemes - Branding themes for the University of Oslo, Norway
Contains templates, themeing files and functions. Made specifically for branding purposes for the University of Oslo.
Last updated 4 years ago
brandinguio
14 stars 1.38 score 74 dependenciesuiothemes - Branding themes for the University of Oslo, Norway
Contains templates, themeing files and functions. Made specifically for branding purposes for the University of Oslo.
Last updated 4 years ago
brandinguio
14 stars 1.38 score 74 dependenciesggsegSchaefer - Schaefer datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Schaefer atlases to plot using functions from those two packages.
Last updated 3 years ago
9 stars 1.08 score 82 dependenciesnettskjemar - Connect to the 'nettskjema.no' API of the University of Oslo
Enables users to retrieve data, meta-data, and codebooks from <https://nettskjema.no/>. The data from the API is richer than from the online data portal. Mowinckel (2021) <doi:10.5281/zenodo.4745481>.
Last updated 3 years ago
2 stars 1.01 score 30 dependenciesggsegYeo2011 - Yeo 2011 Datasets for the 'ggseg'-Package
This is a support package for the ggseg, and ggseg3d packages. It contains the Yeo 2011 atlases to plot using functions from those two packages.
Last updated 1 years ago
7 stars 0.82 score 0 dependenciestsdrtools - Convenience package for installing R-packages on UiO TSD
Some packages are hard to install on the secure closed server of the University of Oslo, TSD This package has some functions to help users more easily install packages to TSD that cannot be installed using the mini-CRAN service within TSD.
Last updated 2 years ago
6 stars 0.82 score 0 dependenciestsdrtools - Convenience package for installing R-packages on UiO TSD
Some packages are hard to install on the secure closed server of the University of Oslo, TSD This package has some functions to help users more easily install packages to TSD that cannot be installed using the mini-CRAN service within TSD.
Last updated 2 years ago
6 stars 0.82 score 0 dependenciesggsegBrodmann - brodmann datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the brodmann area atlases to plot using functions from those two packages.
Last updated 3 years ago
6 stars 0.71 score 82 dependenciesggsegTracula - Tracula datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Tracula atlases to plot using functions from those two packages.
Last updated 9 months ago
3 stars 0.49 score 0 dependenciesggsegGlasser - Glasser datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Glasser atlases to plot using functions from those two packages.
Last updated 3 years ago
4 stars 0.49 score 0 dependenciesggsegJHU - JHU datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the JHU atlases to plot using functions from those two packages.
Last updated 3 years ago
4 stars 0.49 score 0 dependenciesquestionnaires - Package with functions to calculate components and sums for LCBC questionnaires
Creates summaries and factorials of answers to questionnaires.
Last updated 1 years ago
3 stars 0.36 score 24 dependenciestidyquintro - Quick Intro to Tidyverse
A 4 hour workshop with quick introduction to tidyverse.
Last updated 2 years ago
3 stars 0.36 score 125 dependenciesggsegBrainnetome - Brainnetome datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Brainnetome atlases to plot using functions from those two packages.
Last updated 3 years ago
3 stars 0.36 score 0 dependenciesggsegChen - Chen datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Chen atlases to plot using functions from those two packages.
Last updated 3 years ago
2 stars 0.23 score 0 dependenciesggsegHO - Harvard-Oxford datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the Harvard-Oxford cortical atlases to plot using functions from those two packages.
Last updated 3 years ago
2 stars 0.23 score 31 dependenciesggsegAicha - aicha datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the aicha atlases to plot using functions from those two packages.
Last updated 3 years ago
2 stars 0.23 score 82 dependenciesggsegDefaultExtra - Extra dk and aseg datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the extra dk and aseg, with some minor differences from the original atlases to plot using functions from those two packages.
Last updated 3 years ago
2 stars 0.23 score 0 dependenciesneuromat - Create Model Matrices for Neuroimaging Analyses
Neuroimaging software often requires the specification of model matrices to run analyses. These can be difficult to correctly. This package helps neuroscientists to create such This includes creating qdec-files for Freesurfer Linear Mixes Effects models.
Last updated 7 months ago
0.09 score 0 dependenciesggsegICBM - ICBM datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the ICBM atlases to plot using functions from those two packages.
Last updated 1 years ago
1 stars 0.09 score 0 dependenciesgbhs - Lifebrain Global Brain Health Survey Data
Between June 2019 and August 2020, Lifebrain conducted the Global Brain Health Survey to collect data on people’s perceptions of brain health and willingness to take care of their brain by adopting new lifestyles. The survey was conducted online and translated into 14 languages to reach as many people as possible. In total, it collected 27,590 responses from people in 81 countries. This package contains code and data from this survey.
Last updated 2 years ago
1 stars 0.09 score 62 dependencieslcbcr - LCBC brand package
Functions and setups with brand styling and lab general setups.
Last updated 2 years ago
0.09 score 45 dependenciesggsegArslan - arslan datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the arslan atlases to plot using functions from those two packages.
Last updated 3 years ago
1 stars 0.09 score 82 dependenciesggsegAal - aal datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the aal atlases to plot using functions from those two packages.
Last updated 3 years ago
1 stars 0.09 score 82 dependenciesggsegGordon - gordon datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the gordon atlases to plot using functions from those two packages.
Last updated 3 years ago
1 stars 0.09 score 82 dependenciesggsegIca - ica datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the ica atlases to plot using functions from those two packages.
Last updated 3 years ago
1 stars 0.09 score 82 dependenciesggsegDKT - Desikan-Killiany-Tourville datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the DKT atlases to plot using functions from those two packages.
Last updated 3 years ago
1 stars 0.09 score 0 dependenciesnoasr - NOAS convenience functions
Functions created to work well with LCBC's Nephew of All Spreadsheet data.
Last updated 4 years ago
0.09 score 32 dependenciespsykinematix - Utilities to work with data from Psykinematix Visual Psychophysics
Psykinematix Visual Psychophysics is a tool to develop and deploy psychophysical experiments. This packages enables the user to read in data from this tool into R for further processing.
Last updated 3 years ago
0.00 score 27 dependenciesggsegEconomo - economo datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the economo atlases to plot using functions from those two packages.
Last updated 3 years ago
0.00 score 82 dependenciesggsegPower - power datasets for the ggseg-plotting tool
This is a support package for the ggseg, and ggseg3d packages. It contains the power atlases to plot using functions from those two packages.
Last updated 3 years ago
0.00 score 82 dependenciesConversions - Collection of functions that convert certain RAW data in the LCBC database
Collection of functions that convert certain RAW data in the LCBC database.
Last updated 4 years ago
0.00 score 44 dependencies